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Download EndnoteCharacterization of the Active Site of Udp-Sulfoquinovose Synthase: Formation of the Sulfonic Acid Product in the Crystalline State
Theisen, M.J., Sanda, S.L., Ginell, S.L., Benning, C., Garavito, R.M.To be published.
1I24
HIGH RESOLUTION CRYSTAL STRUCTURE OF THE WILD-TYPE PROTEIN SQD1, WITH NAD AND UDP-GLUCOSE
- DOI: 10.2210/pdb1I24/pdb
- Classification: BIOSYNTHETIC PROTEIN
- Organism(s): Arabidopsis thaliana
- Expression System: Escherichia coli
- Deposited: 2001-02-05 Released: 2003-07-01
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.2 Å
- R-Value Free: 0.198
- R-Value Work: 0.192
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | A | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | Ligand Interaction | |
| UPG Query on UPG | A | URIDINE-5'-DIPHOSPHATE-GLUCOSE URIDINE-5'-MONOPHOSPHATE GLUCOPYRANOSYL-MONOPHOSPHATE ESTER C15 H24 N2 O17 P2 HSCJRCZFDFQWRP-JZMIEXBBSA-N |  | Ligand Interaction | |
| NAD Query on NAD | A | NICOTINAMIDE-ADENINE-DINUCLEOTIDE C21 H27 N7 O14 P2 BAWFJGJZGIEFAR-NNYOXOHSSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.2 Å
- R-Value Free: 0.198
- R-Value Work: 0.192
- Space Group: I 41 2 2
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 160.243 | α = 90.00 |
| b = 160.243 | β = 90.00 |
| c = 99.273 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| TRUNCATE | data reduction |
| CCP4 | data scaling |
| d*TREK | data reduction |
| HKL-2000 | data collection |
| CNS | phasing |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
| CNS | refinement |
| d*TREK | data scaling |
Entry History
Deposition Data
- Deposited Date: 2001-02-05
- Released Date: 2003-07-01
- Deposition Author(s): Theisen, M.J., Sanda, S.L., Ginell, S.L., Benning, C., Garavito, R.M.
