Characterization of the Active Site of Udp-Sulfoquinovose Synthase: Formation of the Sulfonic Acid Product in the Crystalline State
Theisen, M.J., Sanda, S.L., Ginell, S.L., Benning, C., Garavito, R.M.To be published.
Experimental Data Snapshot
wwPDB Validation 3D Report Full Report
Find similar proteins by: Sequence  |  Structure
Entity ID: 1 | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details |
SULFOLIPID BIOSYNTHESIS PROTEIN SQD1 | A | 404 | Arabidopsis thaliana | Mutation(s): 0  Gene Names: SQD1 EC: 3.13.1.1 |
Find proteins for O48917 (Arabidopsis thaliana) Go to UniProtKB:  O48917 |
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | A | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | ![]() |  Ligand Interaction | |
UPG Query on UPG | A | URIDINE-5'-DIPHOSPHATE-GLUCOSE URIDINE-5'-MONOPHOSPHATE GLUCOPYRANOSYL-MONOPHOSPHATE ESTER C15 H24 N2 O17 P2 HSCJRCZFDFQWRP-JZMIEXBBSA-N | ![]() |  Ligand Interaction | |
NAD Query on NAD | A | NICOTINAMIDE-ADENINE-DINUCLEOTIDE C21 H27 N7 O14 P2 BAWFJGJZGIEFAR-NNYOXOHSSA-N | ![]() |  Ligand Interaction |
Length (Å) | Angle (°) |
---|---|
a = 160.243 | α = 90.00 |
b = 160.243 | β = 90.00 |
c = 99.273 | γ = 90.00 |
Software Name | Purpose |
---|---|
TRUNCATE | data reduction |
CCP4 | data scaling |
d*TREK | data reduction |
HKL-2000 | data collection |
CNS | phasing |
HKL-2000 | data reduction |
SCALEPACK | data scaling |
CNS | refinement |
d*TREK | data scaling |