Biological Assembly 1  

 3D View: Structure | 1D-3D View | Validation Report

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 2.91 kDa 
• Atom Count: 205 
• Modelled Residue Count: 26 
• Deposited Residue Count: 26 
• Unique protein chains: 1

1HZ3

ALZHEIMER'S DISEASE AMYLOID-BETA PEPTIDE (RESIDUES 10-35)

• PDB DOI: 10.2210/pdb1HZ3/pdb

• Classification: SUGAR BINDING PROTEIN
• Mutation(s): No 


• Deposited: 2001-01-23 Released: 2001-01-31 
• Deposition Author(s): Zhang, S., Iwata, K., Lachenmann, M.J., Peng, J.W., Li, S., Stimson, E.R., Lu, Y., Felix, A.M., Maggio, J.E., Lee, J.P.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 40 
• Conformers Submitted: 15 
• Selection Criteria: structures with the lowest energy 

Literature

The Alzheimer's peptide a beta adopts a collapsed coil structure in water.

Zhang, S., Iwata, K., Lachenmann, M.J., Peng, J.W., Li, S., Stimson, E.R., Lu, Y., Felix, A.M., Maggio, J.E., Lee, J.P.

(2000) J Struct Biol 130: 130-141

• PubMed: 10940221 
• DOI: 10.1006/jsbi.2000.4288
• Primary Citation of Related Structures:  
  1HZ3


• PubMed Abstract: 
  

The self-assembly of the soluble peptide Abeta into Alzheimer's disease amyloid is believed to involve a conformational change. Hence the solution conformation of Abeta is of significant interest. In contrast to studies in other solvents, in water Abeta is collapsed into a compact series of loops, strands, and turns and has no alpha-helical or beta-sheet structure. Conformational stabilization is primarily attributed to van der Waals and electrostatic forces. A large conspicuous uninterrupted hydrophobic patch covers approximately 25% of the surface. The compact coil structure appears meta-stable, and because fibrillization leads to formation of intermolecular beta-sheet secondary structure, a global conformational rearrangement is highly likely. A molecular hypothesis for amyloidosis includes at least two primary driving forces, changes in solvation thermodynamics during formation of amyloid deposits and relief of internal conformational stress within the soluble precursor during formation of lower-energy amyloid fibrils.

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Related Citations: 

• 1H NMR of A-Beta Amyloid Peptide Congeners in Water Solution. Conformational Changes Correlate with Plaque Competence.
  Lee, J.P., Stimson, E.R., Ghilardi, J.R., Mantyh, P.W., Lu, Y.A., Felix, A.M., Llanos, W., Behbin, A., Cummings, M., Van Criekinge, M., Timms, W., Maggio, J.E.
  (1995) Biochemistry 34: 5191

• Simulation Study of the Structure and Dynamics of the Alzheimer's Amyloid Peptide Congener in Solution.
  Massi, F., Peng, J.W., Lee, J.P., Straub, J.E.
  (2001) Biophys J 80: 31

• Energy Landscape Theory for Alzheimer's Amyloid Beta-Peptide Fibril Elongation
  Massi, F., Straub, J.E.
  (2001) Proteins 42: 217

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Organizational Affiliation: 

Department of Chemistry, Boston University, 590 Commonwealth Avenue, Boston, Massachusetts, 02215, USA.

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
A-BETA AMYLOID	A	26	N/A	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for P05067 (Homo sapiens) Explore P05067  Go to UniProtKB:  P05067
PHAROS:  P05067

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 40 
• Conformers Submitted: 15 
• Selection Criteria: structures with the lowest energy 
• OLDERADO: 1HZ3 Olderado

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 2001-01-23 
• Released Date: 2001-01-31 
Deposition Author(s): Zhang, S., Iwata, K., Lachenmann, M.J., Peng, J.W., Li, S., Stimson, E.R., Lu, Y., Felix, A.M., Maggio, J.E., Lee, J.P.

Revision History  

• Version 1.0: 2001-01-31
  Type: Initial release
  
• Version 1.1: 2008-04-27
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2022-02-23
  Changes: Data collection, Database references, Derived calculations