1HQV

STRUCTURE OF APOPTOSIS-LINKED PROTEIN ALG-2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.295 
  • R-Value Work: 0.250 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Structure of apoptosis-linked protein ALG-2: insights into Ca2+-induced changes in penta-EF-hand proteins.

Jia, J.Tarabykina, S.Hansen, C.Berchtold, M.Cygler, M.

(2001) Structure 9: 267-275


  • PubMed Abstract: 
  • The Ca2+ binding apoptosis-linked gene-2 (ALG-2) protein acts as a proapoptotic factor in a variety of cell lines and is required either downstream or independently of caspases for apoptosis to occur. ALG-2 belongs to the penta-EF-hand (PEF) protein ...

    The Ca2+ binding apoptosis-linked gene-2 (ALG-2) protein acts as a proapoptotic factor in a variety of cell lines and is required either downstream or independently of caspases for apoptosis to occur. ALG-2 belongs to the penta-EF-hand (PEF) protein family and has two high-affinity and one low-affinity Ca2+ binding sites. Like other PEF proteins, its N terminus contains a Gly/Pro-rich segment. Ca2+ binding is required for the interaction with the target protein, ALG-2 interacting protein 1 (AIP1).


    Organizational Affiliation

    Biotechnology Research Institute, National Research Council of Canada, Montreal, Quebec.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PROGRAMMED CELL DEATH PROTEIN 6
A
191Mus musculusGene Names: Pdcd6 (Alg2)
Find proteins for P12815 (Mus musculus)
Go to UniProtKB:  P12815
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CA
Query on CA

Download SDF File 
Download CCD File 
A
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.295 
  • R-Value Work: 0.250 
  • Space Group: P 41 2 2
Unit Cell:
Length (Å)Angle (°)
a = 72.060α = 90.00
b = 72.060β = 90.00
c = 91.520γ = 90.00
Software Package:
Software NamePurpose
CCP4model building
CNSrefinement
SCALEPACKdata scaling
DENZOdata reduction
CCP4phasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2001-05-02
    Type: Initial release
  • Version 1.1: 2008-04-27
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Derived calculations, Version format compliance