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Download EndnoteStructural Basis for Flexible Base Recognition by C/Ebpbeta
Tahirov, T.H., Inoue-Bungo, T., Sato, K., Sasaki, M., Ogata, K.To be published.
1GTW
crystal structure of C/EBPbeta bZip homodimer bound to a DNA fragment from the tom-1A promoter
- DOI: 10.2210/pdb1GTW/pdb
- NDB: PD0788
- Classification: TRANSCRIPTION/DNA
- Organism(s): Homo sapiens
- Expression System: Escherichia coli BL21(DE3)
- Deposited: 2002-01-22 Released: 2004-02-06
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.85 Å
- R-Value Free: 0.271
- R-Value Work: 0.231
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| CAAT/ENHANCER BINDING PROTEIN BETA | A, B | 78 | Homo sapiens | Mutation(s): 0 Gene Names: CEBPB (TCF5) |
Find proteins for P17676 (Homo sapiens) Go to Gene View: CEBPB Go to UniProtKB: P17676 | ||||
Entity ID: 2 | ||||
|---|---|---|---|---|
| Molecule | Chains | Length | Organism | |
| 5'-D(*AP*AP*TP*GP*TP*GP*GP*CP*GP*CP* AP*AP*TP*CP*CP*T)-3' | C | 16 | N/A | |
Entity ID: 3 | ||||
|---|---|---|---|---|
| Molecule | Chains | Length | Organism | |
| 5'-D(*TP*AP*GP*GP*AP*TP*TP*GP*CP*GP* CP*CP*AP*CP*AP*T)-3' | D | 16 | N/A | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.85 Å
- R-Value Free: 0.271
- R-Value Work: 0.231
- Space Group: C 2 2 21
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 100.938 | α = 90.00 |
| b = 112.533 | β = 90.00 |
| c = 74.349 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| SCALEPACK | data scaling |
| X-PLOR | phasing |
| CNS | refinement |
| DENZO | data reduction |
Entry History
Deposition Data
- Deposited Date: 2002-01-22
- Released Date: 2004-02-06
- Deposition Author(s): Tahirov, T.H., Ogata, K.
Revision History
- Version 1.0: 2004-02-06
Type: Initial release - Version 1.1: 2014-01-22
Type: Database references, Derived calculations, Non-polymer description, Other, Refinement description, Structure summary, Version format compliance
