1GTW

crystal structure of C/EBPbeta bZip homodimer bound to a DNA fragment from the tom-1A promoter

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.271 
  • R-Value Work: 0.231 
  • R-Value Observed: 0.231 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history. 


Literature

Structural Basis for Flexible Base Recognition by C/Ebpbeta

Tahirov, T.H., Inoue-Bungo, T., Sato, K., Sasaki, M., Ogata, K.

To be published.

Macromolecules

Find similar proteins by: 
(by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
CAAT/ENHANCER BINDING PROTEIN BETAA, B78Homo sapiensMutation(s): 0 
Gene Names: CEBPB, TCF5, PP9092
UniProt & NIH Common Fund Data Resources
Find proteins for P17676 (Homo sapiens)
Explore P17676 
Go to UniProtKB:  P17676
PHAROS:  P17676
GTEx:  ENSG00000172216
Protein Feature View
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  • Reference Sequence
  • Find similar nucleic acids by:  Sequence   |   Structure
    • Entity ID: 2
    MoleculeChainsLengthOrganismImage
    5'-D(*AP*AP*TP*GP*TP*GP*GP*CP*GP*CP* AP*AP*TP*CP*CP*T)-3'C16N/A
    Protein Feature View
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    • Reference Sequence
    • Find similar nucleic acids by:  Sequence   |   Structure
      • Entity ID: 3
      MoleculeChainsLengthOrganismImage
      5'-D(*TP*AP*GP*GP*AP*TP*TP*GP*CP*GP* CP*CP*AP*CP*AP*T)-3'D16N/A
      Protein Feature View
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      • Reference Sequence
      Experimental Data & Validation

      Experimental Data

      • Method: X-RAY DIFFRACTION
      • Resolution: 1.85 Å
      • R-Value Free: 0.271 
      • R-Value Work: 0.231 
      • R-Value Observed: 0.231 
      • Space Group: C 2 2 21
      Unit Cell:
      Length ( Å )Angle ( ˚ )
      a = 100.938α = 90
      b = 112.533β = 90
      c = 74.349γ = 90
      Software Package:
      Software NamePurpose
      CNSrefinement
      DENZOdata reduction
      SCALEPACKdata scaling
      X-PLORphasing

      Structure Validation

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      View more in-depth experimental data

      Entry History 

      Deposition Data

      Revision History  (Full details and data files)

      • Version 1.0: 2004-02-06
        Type: Initial release
      • Version 1.1: 2014-01-22
        Changes: Database references, Derived calculations, Non-polymer description, Other, Refinement description, Structure summary, Version format compliance