1GJI

Crystal structure of c-Rel bound to DNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.279 
  • R-Value Work: 0.227 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

X-ray crystal structure of proto-oncogene product c-Rel bound to the CD28 response element of IL-2.

Huang, D.B.Chen, Y.Q.Ruetsche, M.Phelps, C.B.Ghosh, G.

(2001) Structure 9: 669-678


  • PubMed Abstract: 
  • The proto-oncogene product c-Rel is a Rel/NF-kappaB family transcription factor that plays a critical role in lymphoid cell development and mediates CD28-induced expression of interleukin 2 (IL-2). The CD28 response element (CD28RE) in the IL-2 enhan ...

    The proto-oncogene product c-Rel is a Rel/NF-kappaB family transcription factor that plays a critical role in lymphoid cell development and mediates CD28-induced expression of interleukin 2 (IL-2). The CD28 response element (CD28RE) in the IL-2 enhancer is nonameric and similar to the kappaB DNA target sites recognized by p65 homodimers.


    Organizational Affiliation

    Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093, USA.




Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
C-REL PROTO-ONCOGENE PROTEIN
A, B
275Gallus gallusGene Names: REL
Find proteins for P16236 (Gallus gallus)
Go to Gene View: REL
Go to UniProtKB:  P16236
Entity ID: 1
MoleculeChainsLengthOrganism
IL-2 CD28RE DNAC20N/A
Entity ID: 2
MoleculeChainsLengthOrganism
IL-2 CD28RE DNAD20N/A
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.279 
  • R-Value Work: 0.227 
  • Space Group: P 43 21 2
Unit Cell:
Length (Å)Angle (°)
a = 99.320α = 90.00
b = 99.320β = 90.00
c = 196.250γ = 90.00
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
CNSrefinement
AMoREphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2002-05-30
    Type: Initial release
  • Version 1.1: 2008-04-26
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance