1G5U | pdb_00001g5u

LATEX PROFILIN HEVB8

• PDB DOI: https://doi.org/10.2210/pdb1G5U/pdb

• Classification: ALLERGEN
• Organism(s): Hevea brasiliensis
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2000-11-02 Released: 2000-11-22 
• Deposition Author(s): Fedorov, A.A., Fedorov, E.V., Ganglberger, E., Breiteneder, H., Almo, S.C.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 3.10 Å
• R-Value Free: 
  0.313 (Depositor) 
• R-Value Work: 
  0.259 (Depositor) 

Starting Model: experimental

Literature

A Comparative Structural Analysis of Allergen Profilins HEVB8 and BETV2

Fedorov, A.A., Fedorov, E.V., Ganglberger, E., Breiteneder, H., Almo, S.C.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 28.12 kDa 
• Atom Count: 1,953 
• Modeled Residue Count: 260 
• Deposited Residue Count: 262 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
PROFILIN	A, B	131	Hevea brasiliensis	Mutation(s): 0
UniProt
Find proteins for Q9LEI8 (Hevea brasiliensis) Explore Q9LEI8  Go to UniProtKB:  Q9LEI8

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
NA	C [auth A]	SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 3.10 Å
• R-Value Free:  0.313 (Depositor) 
• R-Value Work:  0.259 (Depositor) 

Space Group: P 3₂

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 58.877	α = 90
b = 58.877	β = 90
c = 83.469	γ = 120

Software Package:

Software Name	Purpose
EPMR	phasing
CNS	refinement
DENZO	data reduction
SCALEPACK	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2000-11-22 
Deposition Author(s): Fedorov, A.A., Fedorov, E.V., Ganglberger, E., Breiteneder, H., Almo, S.C.

Revision History  

• Version 1.0: 2000-11-22
  Type: Initial release
  
• Version 1.1: 2008-04-27
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2023-08-09
  Changes: Data collection, Database references, Derived calculations, Refinement description