Macromolecule Content

Total Structure Weight: 28.12 kDa
Atom Count: 1953
Modelled Residue Count: 260
Deposited Residue Count: 262
Unique protein chains: 1

1G5U

LATEX PROFILIN HEVB8

PDB DOI: 10.2210/pdb1G5U/pdb

Classification: ALLERGEN
Organism(s): Hevea brasiliensis
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2000-11-02 Released: 2000-11-22
Deposition Author(s): Fedorov, A.A., Fedorov, E.V., Ganglberger, E., Breiteneder, H., Almo, S.C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.10 Å
R-Value Free: 0.313
R-Value Work: 0.259

wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

A Comparative Structural Analysis of Allergen Profilins HEVB8 and BETV2

Fedorov, A.A., Fedorov, E.V., Ganglberger, E., Breiteneder, H., Almo, S.C.

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
PROFILIN	A, B	131	Hevea brasiliensis	Mutation(s): 0
UniProt
Find proteins for Q9LEI8 (Hevea brasiliensis) Explore Q9LEI8 Go to UniProtKB: Q9LEI8
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9LEI8
Protein Feature View Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
NA Query on NA Download Ideal Coordinates CCD File SDF format, chain C [auth A] MOL2 format, chain C [auth A]	C [auth A]	SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N		Ligand Interaction

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 3.10 Å
R-Value Free: 0.313
R-Value Work: 0.259
Space Group: P 3₂

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 58.877	α = 90
b = 58.877	β = 90
c = 83.469	γ = 120

Software Package:

Software Name	Purpose
EPMR	phasing
CNS	refinement
DENZO	data reduction
SCALEPACK	data scaling

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Deposited Date: 2000-11-02
Released Date: 2000-11-22

Deposition Author(s):

Ganglberger, E.

Breiteneder, H.

Revision History (Full details and data files)

Version 1.0: 2000-11-22
Type: Initial release
Version 1.1: 2008-04-27
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.