1FNX | pdb_00001fnx

SOLUTION STRUCTURE OF THE HUC RBD1-RBD2 COMPLEXED WITH THE AU-RICH ELEMENT

PDB DOI: https://doi.org/10.2210/pdb1FNX/pdb
NAKB: 1FNX

Classification: immune system/RNA
Organism(s): Mus musculus
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2000-08-24 Released: 2003-06-24
Deposition Author(s): Inoue, M., Hirao, M., Kasashima, K., Kim, I.-S., Kawai, G., Kigawa, T., Sakamoto, H., Muto, Y., Yokoyama, S.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 21
Selection Criteria: structures with the lowest energy. CONFORMER 21 IS THE MINIMIZED AVERAGE STRUCTURE OF CONFORMERS 1-20

wwPDB Validation 3D Report Full Report

Validation slider image for 1FNX

This is version 1.4 of the entry. See complete history.

Literature

Solution structure of mouse HuC RNA-binding domains complexed with an AU-Rich element reveals determinants of neuronal differentiation

Inoue, M., Hirao, M., Kasashima, K., Kim, I.-S., Kawai, G., Kigawa, T., Sakamoto, H., Muto, Y., Yokoyama, S.

To be published.

Macromolecule Content

Total Structure Weight: 22.24 kDa
Atom Count: 1,551
Modeled Residue Count: 184
Deposited Residue Count: 184
Unique protein chains: 1
Unique nucleic acid chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
HU ANTIGEN C	B [auth H]	174	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q60900 (Mus musculus) Explore Q60900 Go to UniProtKB: Q60900
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q60900
Sequence Annotations Expand
Reference Sequence

Find similar nucleic acids by: Sequence

Molecule	Chains	Length	Organism	Image
Entity ID: 1
AU-RICH RNA ELEMENT	A [auth R]	10	N/A
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 21
Selection Criteria: structures with the lowest energy. CONFORMER 21 IS THE MINIMIZED AVERAGE STRUCTURE OF CONFORMERS 1-20

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2003-06-24

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2003-06-24
Type: Initial release
Version 1.1: 2008-04-27
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2022-02-23
Changes: Database references, Derived calculations
Version 1.4: 2024-05-22
Changes: Data collection

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.