1FHJ

CRYSTAL STRUCTURE OF AQUOMET HEMOGLOBIN-I OF THE MANED WOLF (CHRYSOCYON BRACHYURUS) AT 2.0 RESOLUTION.

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.80 Å
  • R-Value Free: 0.246 
  • R-Value Work: 0.194 

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Literature

Crystal structure of hemoglobin from the maned wolf (Chrysocyon brachyurus) using synchrotron radiation.

Fadel, V., Canduri, F., Olivieri, J.R., Smarra, A.L., Colombo, M.F., Bonilla-Rodriguez, G.O., de Azevedo, W.F.

(2003) Protein Pept Lett 10: 551-559

  • DOI: 10.2174/0929866033478564
  • Primary Citation of Related Structures:  
    1FHJ

  • PubMed Abstract: 

    • Crystal structure of hemoglobin isolated from the Brazilian maned wolf (Chrysocyon brachyurus) was determined using standard molecular replacement technique and refined using maximum-likelihood and simulated annealing protocols to 1.87A resolution. Structural and functional comparisons between hemoglobins from the Chrysocyon brachyurus and Homo sapiens are discussed, in order to provide further insights in the comparative biochemistry of vertebrate hemoglobins ...

    Crystal structure of hemoglobin isolated from the Brazilian maned wolf (Chrysocyon brachyurus) was determined using standard molecular replacement technique and refined using maximum-likelihood and simulated annealing protocols to 1.87A resolution. Structural and functional comparisons between hemoglobins from the Chrysocyon brachyurus and Homo sapiens are discussed, in order to provide further insights in the comparative biochemistry of vertebrate hemoglobins.

    Related Citations: 
    • Crystallization, Preliminary X-ray Diffraction Analysis and Patterson Search of Oxyhemoglobin I from the Wolf (Chrysocyon brachiurus)
      Smarra, A.L., Fadel, V., Dellamano, M., Olivieri, J.R., de Azevedo Jr., W.F., Bonilla-Rodriguez, G.O.
      (1999) Acta Crystallogr D Biol Crystallogr 55: 1618
    Organizational Affiliation: 

    Departamento de Física-IBILCE-UNESP. CEP 15054-000, Sao José do Rio Preto, SP, Brazil.



Macromolecules
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Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
HEMOGLOBIN (ALPHA CHAIN)A, C141Chrysocyon brachyurusMutation(s): 0 
Gene Names: HBA
UniProt
Find proteins for P60523 (Chrysocyon brachyurus)
Explore P60523 
Go to UniProtKB:  P60523
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP60523
Protein Feature View
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  • Reference Sequence
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(by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
HEMOGLOBIN (BETA CHAIN)B, D146Chrysocyon brachyurusMutation(s): 0 
Gene Names: HBB
UniProt
Find proteins for P60526 (Chrysocyon brachyurus)
Explore P60526 
Go to UniProtKB:  P60526
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP60526
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
HEM
Query on HEM
Download Ideal Coordinates CCD File 
E [auth A],
F [auth B],
G [auth C],
H [auth D]		PROTOPORPHYRIN IX CONTAINING FE
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L		 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.80 Å
  • R-Value Free: 0.246 
  • R-Value Work: 0.194 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 54.184α = 90
b = 87.725β = 90
c = 133.45γ = 90
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
AMoREphasing
X-PLORrefinement

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2001-08-01
    Type: Initial release
  • Version 1.1: 2008-04-27
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance