1F9C

CRYSTAL STRUCTURE OF MLE D178N VARIANT


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.234 
  • R-Value Work: 0.187 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Buried charged surface in proteins.

Kajander, T.Kahn, P.C.Passila, S.H.Cohen, D.C.Lehtio, L.Adolfsen, W.Warwicker, J.Schell, U.Goldman, A.

(2000) Structure Fold.Des. 8: 1203-1214


  • PubMed Abstract: 
  • The traditional picture of charged amino acids in globular proteins is that they are almost exclusively on the outside exposed to the solvent. Buried charges, when they do occur, are assumed to play an essential role in catalysis and ligand binding, ...

    The traditional picture of charged amino acids in globular proteins is that they are almost exclusively on the outside exposed to the solvent. Buried charges, when they do occur, are assumed to play an essential role in catalysis and ligand binding, or in stabilizing structure as, for instance, helix caps.


    Related Citations: 
    • The Refined Crystal Structure of Muconate Lactonising Enzyme from Pseudomonas putida PRS2000 at 1.85 Resolution
      Helin, S.,Kahn, P.C.,Guha, B.L.,Mallows, D.G.,Goldman, A.
      (1995) J.Mol.Biol. 254: 918


    Organizational Affiliation

    Centre for Biotechnology, University of Turku, Turku, Finland.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PROTEIN (MUCONATE CYCLOISOMERASE I)
A, B
372Pseudomonas putidaGene Names: catB
Find proteins for Q51958 (Pseudomonas putida)
Go to UniProtKB:  Q51958
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MN
Query on MN

Download SDF File 
Download CCD File 
A, B
MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.234 
  • R-Value Work: 0.187 
  • Space Group: I 4
Unit Cell:
Length (Å)Angle (°)
a = 136.979α = 90.00
b = 136.979β = 90.00
c = 82.968γ = 90.00
Software Package:
Software NamePurpose
DENZOdata reduction
X-PLORmodel building
X-PLORrefinement
X-PLORphasing
SCALEPACKdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2001-03-07
    Type: Initial release
  • Version 1.1: 2007-10-16
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Derived calculations, Version format compliance