1EY1 | pdb_00001ey1

SOLUTION STRUCTURE OF ESCHERICHIA COLI NUSB

PDB DOI: https://doi.org/10.2210/pdb1EY1/pdb
BMRB: 4737

Classification: TRANSCRIPTION
Organism(s): Escherichia coli
Mutation(s): No

Deposited: 2000-05-05 Released: 2000-06-14
Deposition Author(s): Altieri, A.S., Mazzulla, M.J., Horita, D.A., Coats, R.H., Wingfield, P.T., Byrd, R.A.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 40
Conformers Submitted: 15
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

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This is version 1.5 of the entry. See complete history.

Literature

The structure of the transcriptional antiterminator NusB from Escherichia coli.

Altieri, A.S., Mazzulla, M.J., Horita, D.A., Coats, R.H., Wingfield, P.T., Das, A., Court, D.L., Byrd, R.A.

(2000) Nat Struct Biol 7: 470-474

PubMed: 10881193 Search on PubMed Search on PubMed Central
DOI: https://doi.org/10.1038/75869
Primary Citation Related Structures:
1EY1

PubMed Abstract:
We have determined the solution structure of NusB, a transcription antitermination protein from Escherichia coli. The structure reveals a novel, all alpha-helical protein fold. NusB mutations that cause a loss of function (NusB5) or alter specificity for RNA targets (NusB101) are localized to surface residues and likely affect RNA-protein or protein-protein interactions. Residues that are highly conserved among homologs stabilize the protein core. The solution structure of E. coli NusB presented here resembles that of Mycobacterium tuberculosis NusB determined by X-ray diffraction, but differs substantially from a solution structure of E. coli NusB reported earlier.

Organizational Affiliation

Structural Biophysics Laboratory, National Cancer Institute-FCRDC, Frederick, MD 21702, USA.

Macromolecule Content

Total Structure Weight: 15.71 kDa
Atom Count: 1,106
Modeled Residue Count: 139
Deposited Residue Count: 139
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
ANTITERMINATION FACTOR NUSB	A	139	Escherichia coli	Mutation(s): 0
UniProt
Find proteins for P0A780 (Escherichia coli (strain K12)) Explore P0A780 Go to UniProtKB: P0A780
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0A780
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 40
Conformers Submitted: 15
Selection Criteria: structures with the lowest energy

Structure Validation

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Entry History

Deposition Data

Released Date: 2000-06-14

Deposition Author(s):

Wingfield, P.T.

Revision History (Full details and data files)

Version 1.0: 2000-06-14
Type: Initial release
Version 1.1: 2008-04-27
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2022-02-16
Changes: Database references, Derived calculations
Version 1.4: 2022-06-15
Changes: Structure summary
Version 1.5: 2024-05-22
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.