1DO2

TRIGONAL CRYSTAL FORM OF HEAT SHOCK LOCUS U (HSLU) FROM ESCHERICHIA COLI


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 4 Å
  • R-Value Free: 0.285 
  • R-Value Work: 0.229 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

The structures of HsIU and the ATP-dependent protease HsIU-HsIV.

Bochtler, M.Hartmann, C.Song, H.K.Bourenkov, G.P.Bartunik, H.D.Huber, R.

(2000) Nature 403: 800-805

  • DOI: 10.1038/35001629
  • Primary Citation of Related Structures:  1DO0
  • Also Cited By: 1E94

  • PubMed Abstract: 
  • The degradation of cytoplasmic proteins is an ATP-dependent process. Substrates are targeted to a single soluble protease, the 26S proteasome, in eukaryotes and to a number of unrelated proteases in prokaryotes. A surprising link emerged with the dis ...

    The degradation of cytoplasmic proteins is an ATP-dependent process. Substrates are targeted to a single soluble protease, the 26S proteasome, in eukaryotes and to a number of unrelated proteases in prokaryotes. A surprising link emerged with the discovery of the ATP-dependent protease HslVU (heat shock locus VU) in Escherichia coli. Its protease component HslV shares approximately 20% sequence similarity and a conserved fold with 20S proteasome beta-subunits. HslU is a member of the Hsp100 (Clp) family of ATPases. Here we report the crystal structures of free HslU and an 820,000 relative molecular mass complex of HslU and HslV-the first structure of a complete set of components of an ATP-dependent protease. HslV and HslU display sixfold symmetry, ruling out mechanisms of protease activation that require a symmetry mismatch between the two components. Instead, there is conformational flexibility and domain motion in HslU and a localized order-disorder transition in HslV. Individual subunits of HslU contain two globular domains in relative orientations that correlate with nucleotide bound and unbound states. They are surprisingly similar to their counterparts in N-ethylmaleimide-sensitive fusion protein, the prototype of an AAA-ATPase. A third, mostly alpha-helical domain in HslU mediates the contact with HslV and may be the structural equivalent of the amino-terminal domains in proteasomal AAA-ATPases.


    Related Citations: 
    • HslV-HslU: A Novel ATP-Dependent Protease Complex in Escherichia coli Related to the Eukaryotic Proteasome
      Rohrwild, M.,Coux, O.,Huang, H.C.,Moerschell, R.P.,Yoo, S.J.,Seol, J.H.,Chung, C.H.,Goldberg, A.L.
      (1996) Proc.Natl.Acad.Sci.USA 93: 5808
    • Sequence Analysis of Four New Heat-Shock Genes Constituting the hslTS/ibpAB and hslVU Operons in Escherichia coli
      Chuang, S.E.,Burland, V.,Plunket III, G.,Daniels, D.L.,Blattner, F.R.
      (1993) Gene 134: 1
    • Crystal Structure of Heat Shock Locus V (HslV) from Escherichia coli
      Bochtler, M.,Ditzel, L.,Groll, M.,Huber, R.
      (1997) Proc.Natl.Acad.Sci.USA 94: 6070


    Organizational Affiliation

    Max-Planck-Institut für Biochemie, Planegg, Germany.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PROTEIN (HEAT SHOCK LOCUS U)
A, B, C, D
442Escherichia coli (strain K12)Gene Names: hslU (htpI)
Find proteins for P0A6H5 (Escherichia coli (strain K12))
Go to UniProtKB:  P0A6H5
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ANP
Query on ANP

Download SDF File 
Download CCD File 
A, C
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
C10 H17 N6 O12 P3
PVKSNHVPLWYQGJ-KQYNXXCUSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 4 Å
  • R-Value Free: 0.285 
  • R-Value Work: 0.229 
  • Space Group: P 3 2 1
Unit Cell:
Length (Å)Angle (°)
a = 201.777α = 90.00
b = 201.777β = 90.00
c = 171.628γ = 120.00
Software Package:
Software NamePurpose
SCALEPACKdata scaling
DENZOdata reduction
AMoREphasing
X-PLORrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2000-02-18
    Type: Initial release
  • Version 1.1: 2008-04-27
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Derived calculations, Version format compliance