1AGQ

GLIAL CELL-DERIVED NEUROTROPHIC FACTOR FROM RAT


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.235 
  • R-Value Work: 0.203 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

X-ray structure of glial cell-derived neurotrophic factor at 1.9 A resolution and implications for receptor binding.

Eigenbrot, C.Gerber, N.

(1997) Nat.Struct.Mol.Biol. 4: 435-438


  • PubMed Abstract: 
  • The crystal structure of glial cell-derived neurotrophic factor (GDNF) reveals two independent copies of the dimer that differ significantly through a hinge bending at the central, disulphide-rich region. GDNF is compared with other members of the TG ...

    The crystal structure of glial cell-derived neurotrophic factor (GDNF) reveals two independent copies of the dimer that differ significantly through a hinge bending at the central, disulphide-rich region. GDNF is compared with other members of the TGF-beta family, and potential receptor binding surfaces are identified.


    Related Citations: 
    • A Glial Cell Line-Derived Neurotrophic Factor for Midbrain Dopaminergic Neurons
      Lin, L.F.,Doherty, D.H.,Lile, J.D.,Bektesh, S.,Collins, F.
      (1993) Science 260: 1130
    • The Cystine-Knot Growth-Factor Superfamily
      Sun, P.D.,Davies, D.R.
      (1995) Annu.Rev.Biophys.Biomol.Struct. 24: 269



Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
GLIAL CELL-DERIVED NEUROTROPHIC FACTOR
A, B, C, D
135Rattus norvegicusGene Names: Gdnf
Find proteins for Q07731 (Rattus norvegicus)
Go to UniProtKB:  Q07731
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.235 
  • R-Value Work: 0.203 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 67.850α = 90.00
b = 67.550β = 115.94
c = 71.400γ = 90.00
Software Package:
Software NamePurpose
X-PLORrefinement
SCALEPACKdata scaling
DENZOdata reduction
XSIGHTmodel building
XSIGHTphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1997-06-05
    Type: Initial release
  • Version 1.1: 2008-03-24
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance