1A8L

PROTEIN DISULFIDE OXIDOREDUCTASE FROM ARCHAEON PYROCOCCUS FURIOSUS


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.217 
  • R-Value Work: 0.192 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

A protein disulfide oxidoreductase from the archaeon Pyrococcus furiosus contains two thioredoxin fold units.

Ren, B.Tibbelin, G.de Pascale, D.Rossi, M.Bartolucci, S.Ladenstein, R.

(1998) Nat.Struct.Mol.Biol. 5: 602-611

  • DOI: 10.1038/862

  • PubMed Abstract: 
  • Protein disulfide bond formation is a rate limiting step in protein folding and is catalyzed by enzymes belonging to the protein disulfide oxidoreductase superfamily, including protein disulfide isomerase (PDI) in eucarya and DsbA in bacteria. The fi ...

    Protein disulfide bond formation is a rate limiting step in protein folding and is catalyzed by enzymes belonging to the protein disulfide oxidoreductase superfamily, including protein disulfide isomerase (PDI) in eucarya and DsbA in bacteria. The first high resolution X-ray crystal structure of a protein disulfide oxidoreductase from the hyperthermophilic archaeon Pyrococcus furiosus reveals structural details that suggest a relation to eukaryotic PDI. The protein consists of two homologous structural units with low sequence identity. Each unit contains a thioredoxin fold with a distinct CXXC active site motif. The accessibilities of both active sites are rather different as are, very likely, their redox properties. The protein shows the ability to catalyze the oxidation of dithiols as well as the reduction of disulfide bridges.


    Related Citations: 
    • Erratum. A Protein Disulfide Oxidoreductase from the Archaeon Pyrococcus Furiosus Contains Two Thioredoxin Fold Units
      Ren, B.,Tibbelin, G.,De Pascale, D.,Rossi, M.,Bartolucci, S.,Ladenstein, R.
      (1998) Nat.Struct.Mol.Biol. 5: 924
    • Crystallization and Preliminary X-Ray Structure Analysis of a Hyperthermostable Thioltransferase from the Archaeon Pyrococcus Furiosus
      Ren, B.,Tibbelin, G.,Pascale, D.,Rossi, M.,Bartolucci, S.,Ladenstein, R.
      (1997) J.Struct.Biol. 119: 1


    Organizational Affiliation

    Center for Structural Biochemistry, Karolinska Institutet, NOVUM, Huddinge, Sweden.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PROTEIN DISULFIDE OXIDOREDUCTASE
A
226Pyrococcus furiosusN/A
Find proteins for Q51760 (Pyrococcus furiosus)
Go to UniProtKB:  Q51760
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.217 
  • R-Value Work: 0.192 
  • Space Group: P 65 2 2
Unit Cell:
Length (Å)Angle (°)
a = 110.291α = 90.00
b = 110.291β = 90.00
c = 68.514γ = 120.00
Software Package:
Software NamePurpose
X-PLORphasing
X-PLORmodel building
DENZOdata reduction
X-PLORrefinement
SCALEPACKdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1999-03-30
    Type: Initial release
  • Version 1.1: 2008-03-24
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Derived calculations, Version format compliance
  • Version 1.3: 2011-11-16
    Type: Atomic model