1A6W

B1-8 FV FRAGMENT COMPLEXED WITH A (4-HYDROXY-5-IODO-3-NITROPHENYL) ACETATE COMPOUND


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Work: 0.171 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

X-Ray Structures of Fv Fragment and its (4-Hydroxy-3-Nitrophenyl)Acetate Complex of Murine B1-8 Antibody

Simon, T.Henrick, K.Hirshberg, M.Winter, G.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
B1-8 FV (LIGHT CHAIN)
L
109Mus musculusN/A
Find proteins for P01724 (Mus musculus)
Go to UniProtKB:  P01724
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
B1-8 FV (HEAVY CHAIN)
H
120Mus musculusGene Names: Ighv1-72 (Gm16709)
Find proteins for P01751 (Mus musculus)
Go to UniProtKB:  P01751
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NIP
Query on NIP

Download SDF File 
Download CCD File 
H
4-HYDROXY-5-IODO-3-NITROPHENYLACETYL-EPSILON-AMINOCAPROIC ACID ANION
C14 H16 I N2 O6
LKGGMBQFWIIXJM-UHFFFAOYSA-M
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Work: 0.171 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 72.270α = 90.00
b = 83.510β = 90.00
c = 40.230γ = 90.00
Software Package:
Software NamePurpose
MOSFLMdata reduction
ROTAVATAdata scaling
AGROVATA/ROTAVATAdata reduction
PROLSQrefinement
MLPHAREphasing
AGROVATAdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1998-07-15
    Type: Initial release
  • Version 1.1: 2008-03-24
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance