1A6V

B1-8 FV fragment complexed with a (4-hydroxy-3-nitrophenyl) acetate compound


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Work: 0.296 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

X-Ray Structures of Fv Fragment and its (4-Hydroxy-3-Nitrophenyl)Acetate Complex of Murine B1-8 Antibody

Simon, T.Henrick, K.Hirshberg, M.Winter, G.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
B1-8 FV (LIGHT CHAIN)
L, M, N
110Mus musculusMutation(s): 0 
Find proteins for P01724 (Mus musculus)
Go to UniProtKB:  P01724
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
B1-8 FV (HEAVY CHAIN)
H, I, J
120N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NPC
Query on NPC

Download SDF File 
Download CCD File 
H
4-HYDROXY-3-NITROPHENYLACETYL-EPSILON-AMINOCAPROIC ACID ANION
C14 H17 N2 O6
XAYGJFACOIKJCT-UHFFFAOYSA-M
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Work: 0.296 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 71.760α = 90.00
b = 86.190β = 90.00
c = 111.511γ = 90.00
Software Package:
Software NamePurpose
AGROVATAdata scaling
PROLSQrefinement
AGROVATA/ROTAVATAdata reduction
ROTAVATAdata scaling
MLPHAREphasing
MOSFLMdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1998-07-15
    Type: Initial release
  • Version 1.1: 2008-03-24
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance
  • Version 1.3: 2013-08-14
    Type: Other, Structure summary