7BGB

The H/ACA RNP lobe of human telomerase


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.40 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Structure of human telomerase holoenzyme with bound telomeric DNA.

Ghanim, G.E.Fountain, A.J.van Roon, A.M.Rangan, R.Das, R.Collins, K.Nguyen, T.H.D.

(2021) Nature 593: 449-453

  • DOI: https://doi.org/10.1038/s41586-021-03415-4
  • Primary Citation of Related Structures:  
    7BG9, 7BGB

  • PubMed Abstract: 

    Telomerase adds telomeric repeats at chromosome ends to compensate for the telomere loss that is caused by incomplete genome end replication 1 . In humans, telomerase is upregulated during embryogenesis and in cancers, and mutations that compromise the function of telomerase result in disease 2 . A previous structure of human telomerase at a resolution of 8 Å revealed a vertebrate-specific composition and architecture 3 , comprising a catalytic core that is flexibly tethered to an H and ACA (hereafter, H/ACA) box ribonucleoprotein (RNP) lobe by telomerase RNA. High-resolution structural information is necessary to develop treatments that can effectively modulate telomerase activity as a therapeutic approach against cancers and disease. Here we used cryo-electron microscopy to determine the structure of human telomerase holoenzyme bound to telomeric DNA at sub-4 Å resolution, which reveals crucial DNA- and RNA-binding interfaces in the active site of telomerase as well as the locations of mutations that alter telomerase activity. We identified a histone H2A-H2B dimer within the holoenzyme that was bound to an essential telomerase RNA motif, which suggests a role for histones in the folding and function of telomerase RNA. Furthermore, this structure of a eukaryotic H/ACA RNP reveals the molecular recognition of conserved RNA and protein motifs, as well as interactions that are crucial for understanding the molecular pathology of many mutations that cause disease. Our findings provide the structural details of the assembly and active site of human telomerase, which paves the way for the development of therapeutic agents that target this enzyme.


  • Organizational Affiliation

    Medical Research Council Laboratory of Molecular Biology, Cambridge, UK.


Macromolecules

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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Telomerase Cajal body protein 1A [auth K]548Homo sapiensMutation(s): 0 
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PHAROS:  Q9BUR4
GTEx:  ENSG00000141499 
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UniProt GroupQ9BUR4
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  • Reference Sequence
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
H/ACA ribonucleoprotein complex subunit DKC1B [auth G],
J [auth C]
514Homo sapiensMutation(s): 0 
EC: 5.4.99
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Find proteins for O60832 (Homo sapiens)
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PHAROS:  O60832
GTEx:  ENSG00000130826 
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UniProt GroupO60832
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
H/ACA ribonucleoprotein complex subunit 3C [auth J],
H [auth F]
64Homo sapiensMutation(s): 0 
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Find proteins for Q9NPE3 (Homo sapiens)
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PHAROS:  Q9NPE3
GTEx:  ENSG00000182117 
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
H/ACA ribonucleoprotein complex subunit 1E [auth H],
G [auth D]
217Homo sapiensMutation(s): 0 
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PHAROS:  Q9NY12
GTEx:  ENSG00000109534 
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
H/ACA ribonucleoprotein complex subunit 2F [auth I],
I [auth E]
153Homo sapiensMutation(s): 0 
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Find proteins for Q9NX24 (Homo sapiens)
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PHAROS:  Q9NX24
GTEx:  ENSG00000145912 
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Entity ID: 4
MoleculeChains LengthOrganismImage
RNA (92-MER)D [auth B]451Homo sapiens
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.40 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTREFMAC

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Medical Research Council (MRC, United Kingdom)United KingdomMC_UP_1201/19
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM054198

Revision History  (Full details and data files)

  • Version 1.0: 2021-04-28
    Type: Initial release
  • Version 1.1: 2021-05-05
    Changes: Database references
  • Version 1.2: 2021-06-02
    Changes: Database references
  • Version 1.3: 2024-05-01
    Changes: Data collection, Database references, Refinement description