6WJ5

Structure of human TRPA1 in complex with inhibitor GDC-0334


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

A TRPA1 inhibitor suppresses neurogenic inflammation and airway contraction for asthma treatment.

Balestrini, A.Joseph, V.Dourado, M.Reese, R.M.Shields, S.D.Rouge, L.Bravo, D.D.Chernov-Rogan, T.Austin, C.D.Chen, H.Wang, L.Villemure, E.Shore, D.G.M.Verma, V.A.Hu, B.Chen, Y.Leong, L.Bjornson, C.Hotzel, K.Gogineni, A.Lee, W.P.Suto, E.Wu, X.Liu, J.Zhang, J.Gandham, V.Wang, J.Payandeh, J.Ciferri, C.Estevez, A.Arthur, C.P.Kortmann, J.Wong, R.L.Heredia, J.E.Doerr, J.Jung, M.Vander Heiden, J.A.Roose-Girma, M.Tam, L.Barck, K.H.Carano, R.A.D.Ding, H.T.Brillantes, B.Tam, C.Yang, X.Gao, S.S.Ly, J.Q.Liu, L.Chen, L.Liederer, B.M.Lin, J.H.Magnuson, S.Chen, J.Hackos, D.H.Elstrott, J.Rohou, A.Safina, B.S.Volgraf, M.Bauer, R.N.Riol-Blanco, L.

(2021) J Exp Med 218

  • DOI: https://doi.org/10.1084/jem.20201637
  • Primary Citation of Related Structures:  
    6WJ5

  • PubMed Abstract: 

    Despite the development of effective therapies, a substantial proportion of asthmatics continue to have uncontrolled symptoms, airflow limitation, and exacerbations. Transient receptor potential cation channel member A1 (TRPA1) agonists are elevated in human asthmatic airways, and in rodents, TRPA1 is involved in the induction of airway inflammation and hyperreactivity. Here, the discovery and early clinical development of GDC-0334, a highly potent, selective, and orally bioavailable TRPA1 antagonist, is described. GDC-0334 inhibited TRPA1 function on airway smooth muscle and sensory neurons, decreasing edema, dermal blood flow (DBF), cough, and allergic airway inflammation in several preclinical species. In a healthy volunteer Phase 1 study, treatment with GDC-0334 reduced TRPA1 agonist-induced DBF, pain, and itch, demonstrating GDC-0334 target engagement in humans. These data provide therapeutic rationale for evaluating TRPA1 inhibition as a clinical therapy for asthma.


  • Organizational Affiliation

    Department of Immunology Discovery, Genentech, Inc., South San Francisco, CA.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Transient receptor potential cation channel subfamily A member 1
A, B, C, D
631Homo sapiensMutation(s): 0 
Gene Names: TRPA1ANKTM1
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for O75762 (Homo sapiens)
Explore O75762 
Go to UniProtKB:  O75762
PHAROS:  O75762
GTEx:  ENSG00000104321 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO75762
Sequence Annotations
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  • Reference Sequence
Small Molecules
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONcisTEM
MODEL REFINEMENTPHENIX

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2021-02-17
    Type: Initial release
  • Version 1.1: 2021-08-04
    Changes: Database references
  • Version 1.2: 2021-08-11
    Changes: Database references