6JAU

The complex structure of Pseudomonas aeruginosa MucA/MucB.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.91 Å
  • R-Value Free: 0.193 
  • R-Value Work: 0.173 
  • R-Value Observed: 0.174 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Molecular basis of the lipid-induced MucA-MucB dissociation in Pseudomonas aeruginosa.

Li, T.He, L.Li, C.Kang, M.Song, Y.Zhu, Y.Shen, Y.Zhao, N.Zhao, C.Yang, J.Huang, Q.Mou, X.Tong, A.Yang, J.Wang, Z.Ji, C.Li, H.Tang, H.Bao, R.

(2020) Commun Biol 3: 418-418

  • DOI: https://doi.org/10.1038/s42003-020-01147-1
  • Primary Citation of Related Structures:  
    6JAU

  • PubMed Abstract: 

    MucA and MucB are critical negative modulators of sigma factor AlgU and regulate the mucoid conversion of Pseudomonas aeruginosa. Previous studies have revealed that lipid signals antagonize MucA-MucB binding. Here we report the crystal structure of MucB in complex with the periplasmic domain of MucA and polyethylene glycol (PEG), which unveiled an intermediate state preceding the MucA-MucB dissociation. Based on the biochemical experiments, the aliphatic side chain with a polar group was found to be of primary importance for inducing MucA cleavage. These results provide evidence that the hydrophobic cavity of MucB is a primary site for sensing lipid molecules and illustrates the detailed control of conformational switching within MucA-MucB in response to lipophilic effectors.


  • Organizational Affiliation

    Center of Infectious Diseases, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, Sichuan University and Collaborative Innovation Center of Biotherapy, Chengdu, China.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Sigma factor AlgU regulatory protein MucB303Pseudomonas aeruginosa PAO1Mutation(s): 0 
Gene Names: mucBalgNPA0764
UniProt
Find proteins for P38108 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
Explore P38108 
Go to UniProtKB:  P38108
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP38108
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Sigma factor AlgU negative regulatory protein97Pseudomonas aeruginosa PAO1Mutation(s): 0 
Gene Names: mucAPA0763
UniProt
Find proteins for P38107 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
Explore P38107 
Go to UniProtKB:  P38107
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP38107
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.91 Å
  • R-Value Free: 0.193 
  • R-Value Work: 0.173 
  • R-Value Observed: 0.174 
  • Space Group: C 2 2 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 71.907α = 90
b = 186.429β = 90
c = 50.628γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
PHENIXmodel building
PHASERphasing

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2020-01-29
    Type: Initial release
  • Version 1.1: 2020-08-12
    Changes: Database references, Derived calculations
  • Version 1.2: 2020-08-19
    Changes: Database references