5MR9

Ligand-receptor complex.

PDB DOI: https://doi.org/10.2210/pdb5MR9/pdb

Classification: SIGNALING PROTEIN
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2016-12-21 Released: 2018-01-17
Deposition Author(s): Sandmark, J., Oster, L., Aagaard, A., Roth, R.G., Dahl, G.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.40 Å
R-Value Free: 0.288
R-Value Work: 0.248
R-Value Observed: 0.250

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Structure and biophysical characterisation of the human complex - a role for heparan sulfate

Sandmark, J., Dahl, G., Oster, L., Xu, B., Johansson, P., Akerud, T., Aagaard, A., Davidsson, P., Sorhede-Winzell, M., Rainey, G.J., Roth, R.G.

To be published.

Macromolecule Content

Total Structure Weight: 23.41 kDa
Atom Count: 1,661
Modelled Residue Count: 200
Deposited Residue Count: 204
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Neurturin	A, B	102	Homo sapiens	Mutation(s): 0 Gene Names: NRTN
UniProt & NIH Common Fund Data Resources
Find proteins for Q99748 (Homo sapiens) Explore Q99748 Go to UniProtKB: Q99748
PHAROS: Q99748 GTEx: ENSG00000171119
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q99748
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.40 Å
R-Value Free: 0.288
R-Value Work: 0.248
R-Value Observed: 0.250
Space Group: P 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 58.08	α = 90
b = 32.75	β = 107.06
c = 61.91	γ = 90

Software Package:

Software Name	Purpose
BUSTER	refinement
MOSFLM	data reduction
SCALA	data scaling
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2018-01-17

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2018-01-17
Type: Initial release
Version 1.1: 2019-10-16
Changes: Data collection

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.