Download MendeleyCrystal structure of a chimeric c-Src-SH3 domain with the sequence of the RT-loop from the Abl-SH3 domain at pH 6.5
Camara-Artigas, A.To be published.
5ECA
Crystal structure of a chimeric c-Src-SH3 domain with the sequence of the RT-loop from the Abl-SH3 domain at pH 6.5
- PDB DOI: https://doi.org/10.2210/pdb5ECA/pdb
- Classification: TRANSFERASE
- Organism(s): Gallus gallus
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2015-10-20 Released: 2016-11-09
- Funding Organization(s): Agencia de Innovacion y Desarrollo de Andalucia, Spanish Ministry of Economy and Competitiveness
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.16 Å
- R-Value Free: 0.182
- R-Value Work: 0.158
- R-Value Observed: 0.159
wwPDB Validation 3D Report Full Report
This is version 2.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Proto-oncogene tyrosine-protein kinase Src | 60 | Gallus gallus | Mutation(s): 4 Gene Names: SRC EC: 2.7.10.2 |  | |
UniProt | |||||
Find proteins for P00523 (Gallus gallus) Explore P00523 Go to UniProtKB: P00523 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P00523 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.16 Å
- R-Value Free: 0.182
- R-Value Work: 0.158
- R-Value Observed: 0.159
- Space Group: C 2 2 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 40.85 | α = 90 |
| b = 56.003 | β = 90 |
| c = 52.113 | γ = 90 |
| Software Name | Purpose |
|---|---|
| autoPROC | data reduction |
| Aimless | data scaling |
| PHASER | phasing |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
Entry History & Funding Information
Deposition Data
- Released Date: 2016-11-09 Deposition Author(s): Camara-Artigas, A.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Agencia de Innovacion y Desarrollo de Andalucia | Spain | P09-CVI-5063 |
| Spanish Ministry of Economy and Competitiveness | Spain | BIO2012-39922-C02-02 |
Revision History (Full details and data files)
- Version 1.0: 2016-11-09
Type: Initial release - Version 1.1: 2017-09-13
Changes: Author supporting evidence, Data collection - Version 2.0: 2024-01-10
Changes: Atomic model, Data collection, Database references, Refinement description
