5LL5

Crystal structure of human carbonic anhydrase isozyme XII with 4-(1H-benzimidazol-1-ylacetyl)benzenesulfonamide


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.42 Å
  • R-Value Free: 0.193
  • R-Value Work: 0.164

Literature

Macromolecules
Sequence Display for 5LL5

Classification: LYASE

Total Structure Weight: 121875.05

Macromolecule Entities
Molecule Chains Length Organism Details
Carbonic anhydrase 12 A, B, C, D 263 Homo sapiens EC#: 4.2.1.1 IUBMB
Fragment: human carbonic anhydrase XII
Gene Name(s): CA12 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
6YH
Query on 6YH

A, B, C, D 4-[2-(benzimidazol-1-yl)ethanoyl]benzenesulfonamide
C15 H13 N3 O3 S
OIERKPBIGGJOPY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B, C, D ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A, B, C, D 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.42 Å
  • R-Value Free: 0.193
  • R-Value Work: 0.164
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 77.42 α = 90.00
b = 73.96 β = 108.96
c = 91.33 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-07-26
  • Released Date: 2017-08-16
  • Deposition author(s): Smirnov, A., Manakova, E., Grazulis, S.

Revision History

  • Version 1_0: 2017-08-16

    Type: Initial release