5C6U

Rv3722c aminotransferase from Mycobacterium tuberculosis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.83 Å
  • R-Value Free: 0.175
  • R-Value Work: 0.140

Literature

Macromolecules
Sequence Display for 5C6U

Classification: TRANSFERASE

Total Structure Weight: 48438.50

Macromolecule Entities
Molecule Chains Length Organism Details
Aminotransferase A 435 Mycobacterium tuberculosis Gene Name(s): Rv3722c LH57_20280
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PLP
Query on PLP

A PYRIDOXAL-5'-PHOSPHATE
VITAMIN B6 Phosphate (Synonym)
C8 H10 N O6 P
NGVDGCNFYWLIFO-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PO4
Query on PO4

A PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.83 Å
  • R-Value Free: 0.175
  • R-Value Work: 0.140
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 143.34 α = 90.00
b = 64.79 β = 101.86
c = 51.17 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-06-23
  • Released Date: 2015-07-15
  • Deposition author(s): OSIPIUK, J., Hatzos-Skintges, C., Jedrzejczak, R., Babnigg, G., Sacchettini, J., JOACHIMIAK, A., Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MT

Revision History

  • Version 1_0: 2015-07-15

    Type: Initial release

  • Version 1_1: 2017-09-27

    Type: Author supporting evidence, Derived calculations, Source and taxonomy