5BYJ

Schistosoma mansoni (Blood Fluke) Sulfotransferase/R-oxamniquine Complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.173

Literature

Macromolecules
Sequence Display for 5BYJ

Classification: TRANSFERASE

Total Structure Weight: 30683.10

Macromolecule Entities
Molecule Chains Length Organism Details
Sulfotransferase A 259 Schistosoma mansoni Gene Name(s): Smp_089320
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
A3P
Query on A3P

A ADENOSINE-3'-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
WHTCPDAXWFLDIH-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
OQR
Query on OQR

A {(2R)-7-nitro-2-[(propan-2-ylamino)methyl]- 1,2,3,4-tetrahydroquinolin-6-yl}methanol
oxamniquine (Synonym)
C14 H21 N3 O3
XCGYUJZMCCFSRP-GFCCVEGCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.173
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 140.54 α = 90.00
b = 39.24 β = 90.00
c = 54.01 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-06-10
  • Released Date: 2015-09-30
  • Deposition author(s): Taylor, A.B., Cao, X., Holloway, S.P., Hart, P.J.

Revision History

  • 2015-11-18
    Type: Database references, Structure summary