4XHK

PIM1 kinase in complex with Compound 1s


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.184
  • R-Value Work: 0.156

Literature

Macromolecules
Sequence Display for 4XHK

Classification: TRANSFERASE / TRANSFERASE INHIBITOR

Total Structure Weight: 36369.31

Macromolecule Entities
Molecule Chains Length Organism Details
Serine/threonine-protein kinase pim-1 B 315 Homo sapiens EC#: 2.7.11.1 IUBMB
Fragment: Protein kinase domain residues 92-404
Gene Name(s): PIM1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
3YR
Query on 3YR

B 2-(2,6-difluorophenyl)-N-{4-[(3S)-pyrrolidin- 3-yloxy]pyridin-3-yl}-1,3-thiazole-4-carboxamide
C19 H16 F2 N4 O2 S
DNXZIJKGPFJRAA-NSHDSACASA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
3YR IC50: 5 nM (100) BindingDB

N/A in BindingMoad
N/A in PDBbind
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
SEP
Query on SEP
B L-PEPTIDE LINKING C3 H8 N O6 P SER

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.184
  • R-Value Work: 0.156
  • Space Group: P 65

Unit Cell:

Length (Å) Angle (°)
a = 96.99 α = 90.00
b = 96.99 β = 90.00
c = 80.77 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-01-05
  • Released Date: 2015-02-11
  • Deposition author(s): Marcotte, D.J., Silvian, L.F.

Revision History

  • Version 1_0: 2015-02-11

    Type: Initial release