Structure of Metallo-beta-lactamase
Ferguson, J.A., Makena, A., Brem, J., McDonough, A.M., Schofield, C.J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Class B metallo-beta-lactamase | 231 | Escherichia coli | Mutation(s): 0  Gene Names: NDM-3, blaNDM-3 | ||
UniProt | |||||
Find proteins for I3VKD5 (Escherichia coli) Explore I3VKD5  Go to UniProtKB:  I3VKD5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | I3VKD5 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CD Query on CD | E [auth A] | CADMIUM ION Cd WLZRMCYVCSSEQC-UHFFFAOYSA-N | |||
ZN Query on ZN | B [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
CO Query on CO | C [auth A] | COBALT (II) ION Co XLJKHNWPARRRJB-UHFFFAOYSA-N | |||
NI Query on NI | D [auth A], F [auth A], G [auth A], H [auth A] | NICKEL (II) ION Ni VEQPNABPJHWNSG-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 120.908 | α = 90 |
b = 120.908 | β = 90 |
c = 90.19 | γ = 90 |
Software Name | Purpose |
---|---|
HKL-2000 | data reduction |
HKL-2000 | data scaling |
Coot | model building |
PHASER | phasing |
PHENIX | refinement |
Funding Organization | Location | Grant Number |
---|---|---|
Medical Research Council (United Kingdom) | United Kingdom | G1100135 |