Download MendeleyCrystal structure of the Src tyrosine kinase SH3 domain T96G/Q128R mutant
Camara-Artigas, A.To be published.
4RTX
Crystal structure of the Src tyrosine kinase SH3 domain T96G/Q128R mutant
- PDB DOI: https://doi.org/10.2210/pdb4RTX/pdb
- Classification: PROTEIN BINDING
- Organism(s): Gallus gallus
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2014-11-16 Released: 2015-10-28
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.32 Å
- R-Value Free: 0.207
- R-Value Work: 0.171
- R-Value Observed: 0.173
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Proto-oncogene tyrosine-protein kinase Src | 61 | Gallus gallus | Mutation(s): 2 Gene Names: SRC EC: 2.7.10.2 |  | |
UniProt | |||||
Find proteins for P00523 (Gallus gallus) Explore P00523 Go to UniProtKB: P00523 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P00523 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EPE Query on EPE | I [auth B], M [auth D] | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID C8 H18 N2 O4 S JKMHFZQWWAIEOD-UHFFFAOYSA-N |  | ||
| SO4 Query on SO4 | F [auth A], G [auth A], J [auth B], N [auth D] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| NI Query on NI | E [auth A], H [auth B], K [auth C], L [auth D] | NICKEL (II) ION Ni VEQPNABPJHWNSG-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.32 Å
- R-Value Free: 0.207
- R-Value Work: 0.171
- R-Value Observed: 0.173
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 40.091 | α = 90 |
| b = 49.966 | β = 95.51 |
| c = 59.845 | γ = 90 |
| Software Name | Purpose |
|---|---|
| Aimless | data scaling |
| PHASER | phasing |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| MOSFLM | data reduction |
| XDS | data reduction |
Entry History
Deposition Data
- Released Date: 2015-10-28 Deposition Author(s): Camara-Artigas, A.
Revision History (Full details and data files)
- Version 1.0: 2015-10-28
Type: Initial release - Version 1.1: 2023-09-20
Changes: Data collection, Database references, Derived calculations, Refinement description
