4BBP

X-ray structure of zinc bound ZnuA in complex with RDS51


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.197 
  • R-Value Observed: 0.199 

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Ligand Structure Quality Assessment 


This is version 1.2 of the entry. See complete history


Literature

Salmonella Enterica Serovar Typhimurium Growth is Inhibited by the Concomitant Binding of Zn(II) and a Pyrrolyl-Hydroxamate to Znua, the Soluble Component of the Znuabc Transporter.

Ilari, A.Pescatori, L.Di Santo, R.Battistoni, A.Ammendola, S.Falconi, M.Berlutti, F.Valenti, P.Chiancone, E.

(2016) Biochim Biophys Acta 1860: 534

  • DOI: https://doi.org/10.1016/j.bbagen.2015.12.006
  • Primary Citation of Related Structures:  
    4BBP

  • PubMed Abstract: 

    Under conditions of Zn(II) deficiency, the most relevant high affinity Zn(II) transport system synthesized by many Gram-negative bacteria is the ZnuABC transporter. ZnuABC is absent in eukaryotes and plays an important role in bacterial virulence. Consequently, ZnuA, the periplasmic component of the transporter, appeared as a good target candidate to find new compounds able to contrast bacterial growth by interfering with Zn(II) uptake.


  • Organizational Affiliation

    CNR-Institute of Molecular Biology and Pathology and Pasteur Institute Fondazione Cenci Bolognetti c/o Department of Biochemical Sciences, 'Sapienza' University of Rome, Piazzale A. Moro, 5, 00185 Rome, Italy. Electronic address: andrea.ilari@uniroma1.it.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
ZINC ABC TRANSPORTER, PERIPLASMIC ZINC-BINDING PROTEIN289Salmonella entericaMutation(s): 0 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.197 
  • R-Value Observed: 0.199 
  • Space Group: P 63
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 143.197α = 90
b = 143.197β = 90
c = 30.833γ = 120
Software Package:
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
MOLREPphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2013-10-16
    Type: Initial release
  • Version 1.1: 2016-04-20
    Changes: Database references
  • Version 1.2: 2023-12-20
    Changes: Data collection, Database references, Derived calculations, Other, Refinement description