Crystal structure of Dcsbis GGDEF domain complexed with c-di-GMP
Chen, Y., Liu, C., Liu, S., Chi, K., Gu, L.To be published.
Experimental Data Snapshot
Starting Model: other
View more details
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
diguanylate cyclase | 223 | Pseudomonas aeruginosa PAO1 | Mutation(s): 0  Gene Names: PA2771 EC: 2.7.7.65 | ||
UniProt | |||||
Find proteins for Q9I072 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore Q9I072  Go to UniProtKB:  Q9I072 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9I072 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
C2E Query on C2E | C [auth A], D [auth B] | 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one) C20 H24 N10 O14 P2 PKFDLKSEZWEFGL-MHARETSRSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 93.275 | α = 90 |
b = 42.707 | β = 106.75 |
c = 106.372 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
SCALEPACK | data reduction |
HKL-2000 | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Basic Research Program of China (973 Program) | China | 2015CB150600 |