4Z7X

MdbA protein, a thiol-disulfide oxidoreductase from Actinomyces oris.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.180
  • R-Value Work: 0.124

Literature

Macromolecules
Sequence Display for 4Z7X

Classification: OXIDOREDUCTASE

Total Structure Weight: 51695.29

Macromolecule Entities
Molecule Chains Length Organism Details
MdbA A, B 238 Actinomyces oris Gene Name(s): mdbA ANA_1994
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
3CX
Query on 3CX

A, B (2S)-3-(cyclohexylamino)-2-hydroxypropane- 1-sulfonic acid
C9 H19 N O4 S
INEWUCPYEUEQTN-VIFPVBQESA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.180
  • R-Value Work: 0.124
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 46.88 α = 90.00
b = 66.86 β = 90.00
c = 256.17 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-04-08
  • Released Date: 2015-04-22
  • Deposition author(s): OSIPIUK, J., Reardon-Robinson, M.E., Ton-That, H., JOACHIMIAK, A., Midwest Center for Structural Genomics (MCSG)

Revision History

  • Version 1_0: 2015-04-22

    Type: Initial release

  • Version 1_1: 2015-09-09

    Type: Database references

  • Version 1_2: 2017-09-20

    Type: Author supporting evidence, Database references, Derived calculations