4WY2

Crystal structure of universal stress protein E from Proteus mirabilis in complex with UDP-3-O-[(3R)-3-hydroxytetradecanoyl]-N-acetyl-alpha-glucosamine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.202
  • R-Value Work: 0.172

Literature

Macromolecules
Sequence Display for 4WY2

Classification: STRUCTURAL GENOMICS UNKNOWN FUNCTION

Total Structure Weight: 37418.98

Macromolecule Entities
Molecule Chains Length Organism Details
Universal stress protein E A 319 Proteus mirabilis Gene Name(s): uspE PMI1202
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
U20
Query on U20

A uridine-5'-diphosphate-3-O-(R-3-hydroxymyristoyl)- N-acetyl-D-glucosamine
3R, (Synonym)
C31 H53 N3 O19 P2
TZSJGZGYQDNRRX-MPLCHSTDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 107.88 α = 90.00
b = 107.88 β = 90.00
c = 74.92 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-11-15
  • Released Date: 2014-11-26
  • Deposition author(s): Shumilin, I.A., Shabalin, I.G., Handing, K.B., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)

Revision History

  • Version 1_0: 2014-11-26

    Type: Initial release

  • Version 1_1: 2015-01-14

    Type: Database references

  • Version 1_2: 2017-09-20

    Type: Author supporting evidence, Database references, Derived calculations, Refinement description, Source and taxonomy