Download MendeleyPeptidic Ab-Nonsaturated Ethyl Esters as Inhibitors of the 3C Protease of Coxsackie Virus B3: Crystal Structures, Antiviral Activities, and Resistance Mutations
Tan, J., Anand, K., Mesters, J.R., Hilgenfeld, R.To be published.
3ZYD
Crystal structure of 3C protease of coxsackievirus B3
- PDB DOI: https://doi.org/10.2210/pdb3ZYD/pdb
- Classification: HYDROLASE
- Organism(s): Coxsackievirus B3
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2011-08-22 Released: 2012-08-29
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.225
- R-Value Work: 0.192
- R-Value Observed: 0.194
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 3C PROTEINASE | 184 | Coxsackievirus B3 | Mutation(s): 0 EC: 3.4.22.28 |  | |
UniProt | |||||
Find proteins for Q5UEA2 (Coxsackievirus B3) Explore Q5UEA2 Go to UniProtKB: Q5UEA2 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5UEA2 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GOL Query on GOL | B [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.225
- R-Value Work: 0.192
- R-Value Observed: 0.194
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 76.85 | α = 90 |
| b = 64.38 | β = 116.41 |
| c = 39.36 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| iMOSFLM | data reduction |
| SCALA | data scaling |
| MOLREP | phasing |
Entry History
Deposition Data
- Released Date: 2012-08-29 Deposition Author(s): Tan, J., Anand, K., Mesters, J.R., Hilgenfeld, R.
Revision History (Full details and data files)
- Version 1.0: 2012-08-29
Type: Initial release - Version 1.1: 2019-05-08
Changes: Data collection, Experimental preparation, Other - Version 1.2: 2023-12-20
Changes: Data collection, Database references, Derived calculations, Other, Refinement description
