3X3U

Crystal structure of wild-type of E. coli CutA1

PDB DOI: https://doi.org/10.2210/pdb3X3U/pdb

Classification: METAL BINDING PROTEIN
Organism(s): Escherichia coli K-12
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2015-02-12 Released: 2015-04-15
Deposition Author(s): Tanaka, T., Matsuura, Y., Yutani, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.09 Å
R-Value Free: 0.238
R-Value Work: 0.208
R-Value Observed: 0.208

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of wild-type of E. coli CutA1

Tanaka, T., Matsuura, Y., Yutani, K.

To be published.

Macromolecule Content

Total Structure Weight: 74.05 kDa
Atom Count: 5,097
Modelled Residue Count: 624
Deposited Residue Count: 672
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Divalent-cation tolerance protein CutA	A, B, C, D, E A, B, C, D, E, F	112	Escherichia coli K-12	Mutation(s): 0 Gene Names: b4137, cutA, cutA1, cycY, JW4097
UniProt
Find proteins for P69488 (Escherichia coli (strain K12)) Explore P69488 Go to UniProtKB: P69488
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P69488
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.09 Å
R-Value Free: 0.238
R-Value Work: 0.208
R-Value Observed: 0.208
Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 62.419	α = 90
b = 96.868	β = 90
c = 106.398	γ = 90

Software Package:

Software Name	Purpose
HKL-2000	data collection
MOLREP	phasing
REFMAC	refinement
HKL-2000	data reduction
HKL-2000	data scaling

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2015-04-15

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2015-04-15
Type: Initial release
Version 1.1: 2024-03-20
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.