3K97

HSP90 N-terminal domain in complex with 4-chloro-6-{[(2R)-2-(2-methylphenyl)pyrrolidin-1-yl]carbonyl}benzene-1,3-diol


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.222
  • R-Value Work: 0.195

Literature

Macromolecules
Sequence Display for 3K97

Classification: CHAPERONE

Total Structure Weight: 28882.84

Macromolecule Entities
Molecule Chains Length Organism Details
Heat shock protein HSP 90-alpha A 251 Homo sapiens Fragment: N-terminal domain (UNP residues 9-236)
Gene Name(s): HSP90AA1 Gene View HSP90A HSPC1 HSPCA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
4CD
Query on 4CD

A 4-chloro-6-{[(2R)-2-(2-methylphenyl)pyrrolidin- 1-yl]carbonyl}benzene-1,3-diol
C18 H18 Cl N O3
SOMWPEIBCBZHBS-OAHLLOKOSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
DMS
Query on DMS

A DIMETHYL SULFOXIDE
C2 H6 O S
IAZDPXIOMUYVGZ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
4CD N/A in BindingDB
Ki: 10 nM  BindingMOAD
Ki: 10 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.222
  • R-Value Work: 0.195
  • Space Group: I 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 67.43 α = 90.00
b = 87.48 β = 90.00
c = 98.94 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-10-15
  • Released Date: 2010-02-09
  • Deposition author(s): Gajiwala, K.S.

Revision History

  • Version 1_0: 2010-02-09

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance