3SZ3

Crystal structure of Tryptophanyl-tRNA synthetase from Vibrio cholerae with an endogenous tryptophan


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.179
  • R-Value Work: 0.160

Literature

Macromolecules
Sequence Display for 3SZ3

Classification: LIGASE

Total Structure Weight: 38043.32

Macromolecule Entities
Molecule Chains Length Organism Details
Tryptophanyl-tRNA synthetase A 341 Vibrio cholerae EC#: 6.1.1.2 IUBMB
Gene Name(s): trpS VC_2623
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TRP
Query on TRP

A TRYPTOPHAN
C11 H12 N2 O2
QIVBCDIJIAJPQS-VIFPVBQESA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 76.02 α = 90.00
b = 94.05 β = 90.00
c = 47.04 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-07-18
  • Released Date: 2011-09-14
  • Deposition author(s): Cooper, D.R., Kudritska, M., Chruszcz, M., Savchenko, A., Anderson, W.F., Minor, W., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • Version 1_0: 2011-09-14

    Type: Initial release