3PMD

Crystal structure of the sporulation inhibitor pXO1-118 from Bacillus anthracis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.76 Å
  • R-Value Free: 0.223
  • R-Value Work: 0.178

Literature

Macromolecules
Sequence Display for 3PMD

Classification: LIPID BINDING PROTEIN

Total Structure Weight: 18762.15

Macromolecule Entities
Molecule Chains Length Organism Details
Conserved domain protein A 153 Bacillus anthracis Gene Name(s): GBAA_pXO1_0148 AB163_01700 AB164_13775 AB165_02025 AB167_09055 AB169_22675 AB170_06155 AB171_06190 AB893_28570 ADK17_00610 ADK18_28365 ADT20_29180 ADT21_04515 BASH2_pXO10137 BF27_5775
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
11A
Query on 11A

A UNDECANOIC ACID
C11 H22 O2
ZDPHROOEEOARMN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.76 Å
  • R-Value Free: 0.223
  • R-Value Work: 0.178
  • Space Group: P 32 2 1

Unit Cell:

Length (Å) Angle (°)
a = 89.22 α = 90.00
b = 89.22 β = 90.00
c = 35.82 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-11-16
  • Released Date: 2011-01-19
  • Deposition author(s): Stranzl, G.R., Santelli, E., Bankston, L.A., La Clair, C., Bobkov, A., Schwarzenbacher, R., Godzik, A., Perego, M., Grynberg, M., Liddington, R.C.

Revision History

  • Version 1_0: 2011-01-19

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance