3PHN

Crystal structure of wild-type onconase with resolution 1.46 A


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.46 Å
  • R-Value Free: 0.199
  • R-Value Work: 0.150

Literature

Macromolecules
Sequence Display for 3PHN

Classification: HYDROLASE ANTITUMOR PROTEIN

Total Structure Weight: 12192.88

Macromolecule Entities
Molecule Chains Length Organism Details
Protein P-30 A 104 Rana pipiens EC#: 3.1.27 IUBMB
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ACT
Query on ACT

A ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PCA
Query on PCA
A L-PEPTIDE LINKING C5 H7 N O3 GLU

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.46 Å
  • R-Value Free: 0.199
  • R-Value Work: 0.150
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 32.23 α = 90.00
b = 38.68 β = 90.00
c = 69.59 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-11-04
  • Released Date: 2010-11-17
  • Deposition author(s): Kurpiewska, K., Torrent, G., Ribo, M., Vilanova, M., Loch, J., Lewinski, K.

Revision History

  • 2011-07-13
    Type: Version format compliance