3F3M

Six Crystal Structures of Two Phosphopantetheine Adenylyltransferases Reveal an Alternative Ligand Binding Mode and an Associated Structural Change


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.211

Literature

Macromolecules
Sequence Display for 3F3M

Classification: TRANSFERASE

Total Structure Weight: 19975.57

Macromolecule Entities
Molecule Chains Length Organism Details
Phosphopantetheine adenylyltransferase A 168 Staphylococcus aureus EC#: 2.7.7.3 IUBMB
Gene Name(s): coaD MW1007
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PPS
Query on PPS

A 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE
C10 H15 N5 O13 P2 S
GACDQMDRPRGCTN-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.211
  • Space Group: P 63 2 2

Unit Cell:

Length (Å) Angle (°)
a = 66.77 α = 90.00
b = 66.77 β = 90.00
c = 124.13 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-10-31
  • Released Date: 2009-10-20
  • Deposition author(s): Lee, H.H., Yoon, H.J., Suh, S.W.

Revision History

  • Version 1_0: 2009-10-20

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2012-04-25

    Type: Database references