2OJR

Structure of ubiquitin solved by SAD using the Lanthanide-Binding Tag


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.216

Literature

Macromolecules
Sequence Display for 2OJR

Classification: PROTEIN BINDING

Total Structure Weight: 12761.65

Macromolecule Entities
Molecule Chains Length Organism Details
Ubiquitin A 111 Homo sapiens Gene Name(s): UBC Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TB
Query on TB

A TERBIUM(III) ION
Tb
HKCRVXUAKWXBLE-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.216
  • Space Group: P 32 2 1

Unit Cell:

Length (Å) Angle (°)
a = 57.87 α = 90.00
b = 57.87 β = 90.00
c = 115.26 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-01-13
  • Released Date: 2007-06-12
  • Deposition author(s): Silvaggi, N.R., Allen, K.N.

Revision History

  • Version 1_0: 2007-06-12

    Type: Initial release

  • Version 1_1: 2008-05-01

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-10-18

    Type: Refinement description