2DD3

An alternating sheared AA pair in 5'GGUGAAGGCU/3'PCCGAAGCCG: II. The minor conformation with A6/A5/A16 stack


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 40
  • Conformers Submitted: 18
  • Selection Criteria: Structures with the Lowest Energy Structures with the Least Restraint Violations

Literature

Macromolecules
Sequence Display for 2DD3

Classification: RNA

Total Structure Weight: 6440.99

Macromolecule Entities
Molecule Chains Length Organism Details
5'-R(*GP*GP*UP*GP*AP*AP*GP*GP*CP*U)-3' A 10 synthetic
5'-R(*GP*CP*CP*GP*AP*AP*GP*CP*CP*(P5P))-3' B 10 synthetic

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
P5P
Query on P5P
B RNA LINKING C10 H13 N4 O7 P A

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 40
  • Conformers Submitted: 18
  • Selection Criteria: structures with the lowest energy, structures with the least restraint violations

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-01-19
  • Released Date: 2006-06-13
  • Deposition author(s): Chen, G., Kennedy, S.D., Krugh, T.R., Turner, D.H.

Revision History

  • Version 1_0: 2006-06-13

    Type: Initial release

  • Version 1_1: 2008-04-30

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance