1TL2

TACHYLECTIN-2 FROM TACHYPLEUS TRIDENTATUS (JAPANESE HORSESHOE CRAB)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.202
  • R-Value Work: 0.162

Literature

Macromolecules
Sequence Display for 1TL2

Classification: SUGAR BINDING PROTEIN

Total Structure Weight: 27931.98

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (TACHYLECTIN-2) A 236 Tachypleus tridentatus Mutation: I129V, H213Y
Details: FORMERLY NAMED L10, NOW TACHYLECTIN-2
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NDG
Query on NDG

A 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
C8 H15 N O6
OVRNDRQMDRJTHS-PVFLNQBWSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
NDG N/A in BindingDB
Kd: 51280 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.202
  • R-Value Work: 0.162
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 89.46 α = 90.00
b = 89.46 β = 90.00
c = 73.62 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-12-14
  • Released Date: 1999-12-15
  • Deposition author(s): Beisel, H.-G., Kawabata, S., Iwanaga, S., Huber, R., Bode, W.

Revision History

  • 2008-04-26
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance