8JLV

Beneficial flip of substrate orientation enable determine substrate specificity for zearalenone lactone hydrolase

PDB DOI: https://doi.org/10.2210/pdb8JLV/pdb

Classification: HYDROLASE
Organism(s): Exophiala aquamarina CBS 119918
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2023-06-02 Released: 2023-12-06
Deposition Author(s): Xiang, L., Wang, M., Zhang, G., Zhou, J.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.00 Å
R-Value Free: 0.247
R-Value Work: 0.204
R-Value Observed: 0.206

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Beneficial flip of substrate orientation enable determine substrate specificity for zearalenone lactone hydrolase

Wang, M., Xiang, L., Zhou, J., Zhang, G.

To be published.

Macromolecule Content

Total Structure Weight: 175.89 kDa
Atom Count: 12,360
Modelled Residue Count: 1,584
Deposited Residue Count: 1,584
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
AB hydrolase-1 domain-containing protein	A [auth B] B [auth A] C D E A [auth B], B [auth A], C, D, E, F	264	Exophiala aquamarina CBS 119918	Mutation(s): 0 Gene Names: A1O9_11392
UniProt
Find proteins for A0A072PAD1 (Exophiala aquamarina CBS 119918) Explore A0A072PAD1 Go to UniProtKB: A0A072PAD1
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A072PAD1
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 3.00 Å
R-Value Free: 0.247
R-Value Work: 0.204
R-Value Observed: 0.206
Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 79.892	α = 90
b = 120.326	β = 97.415
c = 102.952	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
PHENIX	refinement
HKL-3000	data reduction
HKL-3000	data scaling
PHENIX	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2023-12-06

Deposition Author(s):

Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	31970059

Revision History (Full details and data files)

Version 1.0: 2023-12-06
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.