Crystal Structure of S-adenosyl-l-homocysteine Hydrolase from Naegleria fowleri with bound NAD and Adenosine
Dranow, D.M., Lorimer, D.D., Edwards, T.E.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
S-adenosyl-l-homocysteine Hydrolase | 480 | Naegleria fowleri | Mutation(s): 0  Gene Names: NF0035640 | ||
UniProt | |||||
Find proteins for A0A1Z0YU84 (Naegleria fowleri) Explore A0A1Z0YU84  Go to UniProtKB:  A0A1Z0YU84 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A1Z0YU84 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAD Query on NAD | E [auth A], HA [auth C], R [auth B], VA [auth D] | NICOTINAMIDE-ADENINE-DINUCLEOTIDE C21 H27 N7 O14 P2 BAWFJGJZGIEFAR-NNYOXOHSSA-N | |||
ADN Query on ADN | F [auth A], IA [auth C], S [auth B], WA [auth D] | ADENOSINE C10 H13 N5 O4 OIRDTQYFTABQOQ-KQYNXXCUSA-N | |||
PO4 Query on PO4 | G [auth A], JA [auth C], T [auth B], XA [auth D] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K | |||
EDO Query on EDO | AA [auth B] AB [auth D] BA [auth B] BB [auth D] CA [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 69.83 | α = 90 |
b = 134.33 | β = 90 |
c = 239.79 | γ = 90 |
Software Name | Purpose |
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XSCALE | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
MoRDa | phasing |