Download MendeleyStructure-Function Relationships in the Myelin Peripheral Membrane Protein P2
Lehtimaki, M., Ruskamo, S., Kursula, P.To be published.
4A8Z
Human myelin P2 protein, K112Q mutant
- PDB DOI: https://doi.org/10.2210/pdb4A8Z/pdb
- Classification: TRANSPORT PROTEIN
- Organism(s): Homo sapiens
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2011-11-22 Released: 2012-12-05
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.203
- R-Value Work: 0.178
- R-Value Observed: 0.179
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| MYELIN P2 PROTEIN | 133 | Homo sapiens | Mutation(s): 1 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P02689 (Homo sapiens) Explore P02689 Go to UniProtKB: P02689 | |||||
PHAROS: P02689 GTEx: ENSG00000147588 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P02689 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PLM Query on PLM | B [auth A] | PALMITIC ACID C16 H32 O2 IPCSVZSSVZVIGE-UHFFFAOYSA-N |  | ||
| SO4 Query on SO4 | F [auth A], G [auth A], H [auth A], I [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| GOL Query on GOL | C [auth A], D [auth A], E [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.203
- R-Value Work: 0.178
- R-Value Observed: 0.179
- Space Group: P 41 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 65.71 | α = 90 |
| b = 65.71 | β = 90 |
| c = 101.19 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| XSCALE | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2012-12-05 Deposition Author(s): Lehtimaki, M., Ruskamo, S., Kursula, P.
Revision History (Full details and data files)
- Version 1.0: 2012-12-05
Type: Initial release - Version 1.1: 2019-07-17
Changes: Data collection - Version 1.2: 2020-04-08
Changes: Other - Version 1.3: 2023-12-20
Changes: Data collection, Database references, Derived calculations, Refinement description
