3HGG

Crystal Structure of CmeR Bound to Cholic Acid

• PDB DOI: https://doi.org/10.2210/pdb3HGG/pdb

• Classification: TRANSCRIPTION
• Organism(s): Campylobacter jejuni
• Mutation(s): No 


• Deposited: 2009-05-13 Released: 2010-06-30 
• Deposition Author(s): Routh, M.D., Yang, F.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.57 Å
• R-Value Free: 0.273 
• R-Value Work: 0.215 
• R-Value Observed: 0.215 

Literature

Structural basis for anionic ligand recognition by multidrug binding proteins: Crystal structures of CmeR-bile acid complexes

Routh, M.D., Yang, F., Su, C.-C., Long, F., Zhang, Q., Yu, E.W.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 25.95 kDa 
• Atom Count: 1,704 
• Modelled Residue Count: 202 
• Deposited Residue Count: 220 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
CmeR	A	220	Campylobacter jejuni	Mutation(s): 0
UniProt
Find proteins for Q7B8P6 (Campylobacter jejuni) Explore Q7B8P6  Go to UniProtKB:  Q7B8P6

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
CHD	B [auth A]	CHOLIC ACID C24 H40 O5 BHQCQFFYRZLCQQ-OELDTZBJSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.57 Å
• R-Value Free: 0.273 
• R-Value Work: 0.215 
• R-Value Observed: 0.215 
• Space Group: P 2₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 93.923	α = 90
b = 37.238	β = 90
c = 57.525	γ = 90

Software Package:

Software Name	Purpose
PHASER	phasing
PHENIX	refinement
PDB_EXTRACT	data extraction
ADSC	data collection
DENZO	data reduction
SCALEPACK	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2010-06-30 
Deposition Author(s): Routh, M.D., Yang, F.

Revision History  

• Version 1.0: 2010-06-30
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2017-11-01
  Changes: Refinement description
• Version 1.3: 2024-02-21
  Changes: Data collection, Database references, Derived calculations