3Q8J

Crystal Structure of Asteropsin A from Marine Sponge Asteropus sp.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.87 Å

wwPDB Validation   3D Report Full Report


This is version 2.0 of the entry. See complete history


Literature

An Uncommon Crystal Structure of a Marine Knottin Peptide from Asteropus sp.

Li, H.Bowling, J.J.Fronczek, F.R.Hong, J.Hamann, M.T.Jung, J.H.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Asteropsin A37AsteropusMutation(s): 0 
UniProt
Find proteins for I1SB10 (Asteropus)
Explore I1SB10 
Go to UniProtKB:  I1SB10
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupI1SB10
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
MOH
Query on MOH

Download Ideal Coordinates CCD File 
B [auth A]
C [auth A]
D [auth A]
E [auth A]
F [auth A]
B [auth A],
C [auth A],
D [auth A],
E [auth A],
F [auth A],
G [auth A],
H [auth A],
I [auth A],
J [auth A],
K [auth A],
L [auth A]
METHANOL
C H4 O
OKKJLVBELUTLKV-UHFFFAOYSA-N
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
PCA
Query on PCA
A
L-PEPTIDE LINKINGC5 H7 N O3GLN
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.87 Å
  • Space Group: P 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 14.8028α = 83.19
b = 18.5573β = 84.1
c = 24.1784γ = 68.04
Software Package:
Software NamePurpose
SHELXrefinement
PDB_EXTRACTdata extraction
SHELXLrefinement
SHELXL-97refinement

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2012-04-18
    Type: Initial release
  • Version 1.1: 2012-10-31
    Changes: Database references
  • Version 1.2: 2017-11-08
    Changes: Refinement description
  • Version 2.0: 2019-12-25
    Changes: Derived calculations, Polymer sequence