2JZM

Chymotrypsin inhibitor C1 from Nicotiana alata


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 50 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Structural refinement of insecticidal plant proteinase inhibitors from Nicotiana alata.

Schirra, H.J.Anderson, M.A.Craik, D.J.

(2008) Protein Pept Lett 15: 903-909

  • DOI: https://doi.org/10.2174/092986608785849326
  • Primary Citation of Related Structures:  
    2JZM

  • PubMed Abstract: 

    Ornamental tobacco (Nicotiana alata) produces a series of 6 kDa proteinase inhibitors belonging to the potato type II inhibitor family. These proteins inhibit trypsin and chymotrypsin, the main digestive enzymes of predatory insects, thus leading to starvation, impaired larval development or death. In this context, the three-dimensional structures of these inhibitors are important for developing novel strategies for pest control. The solution structures of C1 and T1, the two main prototypes of the N. alata inhibitors, were originally determined more than a decade ago (J. Mol. Biol. 242, 231-243 (1994) and Biochemistry 34, 14304-14311 (1995)). Since then methods for NMR structure calculations have evolved considerably. Here we report the refinement of the structures of C1 and T1 with state-of-the-art protocols for NMR structure calculations. This refinement leads to an improved quality of the structures, making them a more reliable basis for the development of novel pesticides and modeling applications.


  • Organizational Affiliation

    Institute for Molecular Bioscience, The University of Queensland, Brisbane, Qld 4072, Australia.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Proteinase inhibitor53Nicotiana alataMutation(s): 0 
UniProt
Find proteins for Q40378 (Nicotiana alata)
Explore Q40378 
Go to UniProtKB:  Q40378
Entity Groups  
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UniProt GroupQ40378
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 50 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2008-11-25
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2019-10-09
    Changes: Data collection, Database references, Derived calculations, Experimental preparation