YF5

Agmatinamic acid

Created:	2023-12-04
Last modified:	2024-09-27

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2 entries where YF5 is found in a polymer sequence

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Chemical Details
Formal Charge	0
Atom Count	41
Chiral Atom Count	4
Bond Count	40
Aromatic Bond Count	0

2D diagram of YF5

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Chemical Component Summary
Name	Agmatinamic acid
Synonyms	(2R,3S,5S,6R)-6-azanyl-9-carbamimidamido-2,3,5-tris(oxidanyl)nonanoic acid; AGA
Systematic Name (OpenEye OEToolkits)	(2~{R},3~{S},5~{S},6~{R})-6-azanyl-9-carbamimidamido-2,3,5-tris(oxidanyl)nonanoic acid
Formula	C₁₀ H₂₂ N₄ O₅
Molecular Weight	278.305
Type	PEPTIDE LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	CACTVS	3.385	N[CH](CCCNC(N)=N)[CH](O)C[CH](O)[CH](O)C(O)=O
SMILES	OpenEye OEToolkits	2.0.7	C(CC(C(CC(C(C(=O)O)O)O)O)N)CNC(=N)N
Canonical SMILES	CACTVS	3.385	N[C@H](CCCNC(N)=N)[C@@H](O)C[C@H](O)[C@@H](O)C(O)=O
Canonical SMILES	OpenEye OEToolkits	2.0.7	[H]/N=C(\N)/NCCC[C@H]([C@H](C[C@@H]([C@H](C(=O)O)O)O)O)N
InChI	InChI	1.06	InChI=1S/C10H22N4O5/c11-5(2-1-3-14-10(12)13)6(15)4-7(16)8(17)9(18)19/h5-8,15-17H,1-4,11H2,(H,18,19)(H4,12,13,14)/t5-,6+,7+,8-/m1/s1
InChIKey	InChI	1.06	GRIHTJROSVTQAL-VGRMVHKJSA-N

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.