XB9

N-carbamoyl-2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosylamine

Created:	2023-10-27
Last modified:	2024-03-20

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4 entries where XB9 is found in a polymer sequence

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Chemical Details
Formal Charge	0
Atom Count	29
Chiral Atom Count	3
Bond Count	29
Aromatic Bond Count	0

2D diagram of XB9

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Chemical Component Summary
Name	N-carbamoyl-2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosylamine
Systematic Name (OpenEye OEToolkits)	[(2~{R},3~{S},5~{R})-5-(aminocarbonylamino)-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate
Formula	C₆ H₁₃ N₂ O₇ P
Molecular Weight	256.15
Type	NON-POLYMER

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	OC1CC(NC(=O)N)OC1COP(=O)(O)O
SMILES	CACTVS	3.385	NC(=O)N[CH]1C[CH](O)[CH](CO[P](O)(O)=O)O1
SMILES	OpenEye OEToolkits	2.0.7	C1C(C(OC1NC(=O)N)COP(=O)(O)O)O
Canonical SMILES	CACTVS	3.385	NC(=O)N[C@H]1C[C@H](O)[C@@H](CO[P](O)(O)=O)O1
Canonical SMILES	OpenEye OEToolkits	2.0.7	C1[C@@H]([C@H](O[C@H]1NC(=O)N)COP(=O)(O)O)O
InChI	InChI	1.06	InChI=1S/C6H13N2O7P/c7-6(10)8-5-1-3(9)4(15-5)2-14-16(11,12)13/h3-5,9H,1-2H2,(H3,7,8,10)(H2,11,12,13)/t3-,4+,5+/m0/s1
InChIKey	InChI	1.06	HSXUVWHNWPQKRN-VPENINKCSA-N

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.