X9L

5'-S-(2-{[(3-bromophenyl)methyl]amino}ethyl)-5'-thioadenosine

Created:	2023-10-26
Last modified:	2025-04-02

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1 entries where X9L is found as a standalone ligand

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Chemical Details
Formal Charge	0
Atom Count	53
Chiral Atom Count	4
Bond Count	56
Aromatic Bond Count	16

2D diagram of X9L

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Chemical Component Summary
Name	5'-S-(2-{[(3-bromophenyl)methyl]amino}ethyl)-5'-thioadenosine
Systematic Name (OpenEye OEToolkits)	(2~{R},3~{R},4~{S},5~{S})-2-(6-aminopurin-9-yl)-5-[2-[(3-bromophenyl)methylamino]ethylsulfanylmethyl]oxolane-3,4-diol
Formula	C₁₉ H₂₃ Br N₆ O₃ S
Molecular Weight	495.393
Type	NON-POLYMER

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	Brc1cccc(c1)CNCCSCC1OC(n2cnc3c(N)ncnc32)C(O)C1O
SMILES	CACTVS	3.385	Nc1ncnc2n(cnc12)[CH]3O[CH](CSCCNCc4cccc(Br)c4)[CH](O)[CH]3O
SMILES	OpenEye OEToolkits	2.0.7	c1cc(cc(c1)Br)CNCCSCC2C(C(C(O2)n3cnc4c3ncnc4N)O)O
Canonical SMILES	CACTVS	3.385	Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CSCCNCc4cccc(Br)c4)[C@@H](O)[C@H]3O
Canonical SMILES	OpenEye OEToolkits	2.0.7	c1cc(cc(c1)Br)CNCCSC[C@@H]2[C@H]([C@H]([C@@H](O2)n3cnc4c3ncnc4N)O)O
InChI	InChI	1.06	InChI=1S/C19H23BrN6O3S/c20-12-3-1-2-11(6-12)7-22-4-5-30-8-13-15(27)16(28)19(29-13)26-10-25-14-17(21)23-9-24-18(14)26/h1-3,6,9-10,13,15-16,19,22,27-28H,4-5,7-8H2,(H2,21,23,24)/t13-,15-,16-,19-/m1/s1
InChIKey	InChI	1.06	JGFTVBMOETWOQF-NVQRDWNXSA-N

Related Resource References

Resource Name	Reference
PubChem	172908648

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.