US5

1-(5-O-phosphono-beta-D-ribofuranosyl)-4-selanylpyrimidin-2(1H)-one

Created:	2009-07-17
Last modified:	2021-03-01

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2 entries where US5 is found in a polymer sequence

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Chemical Details
Formal Charge	0
Atom Count	34
Chiral Atom Count	4
Bond Count	35
Aromatic Bond Count	0

2D diagram of US5

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Chemical Component Summary
Name	1-(5-O-phosphono-beta-D-ribofuranosyl)-4-selanylpyrimidin-2(1H)-one
Synonyms	4-Se-ribouridine-5'-phosphate
Systematic Name (OpenEye OEToolkits)	[(2R,3S,4R,5R)-3,4-dihydroxy-5-(2-oxo-4-selanyl-pyrimidin-1-yl)oxolan-2-yl]methyl dihydrogen phosphate
Formula	C₉ H₁₃ N₂ O₈ P Se
Molecular Weight	387.142
Type	RNA LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	11.02	O=P(O)(O)OCC2OC(N1C(=O)N=C([SeH])C=C1)C(O)C2O
SMILES	CACTVS	3.352	O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)N2C=CC(=NC2=O)[SeH]
SMILES	OpenEye OEToolkits	1.7.0	C1=CN(C(=O)N=C1[SeH])C2C(C(C(O2)COP(=O)(O)O)O)O
Canonical SMILES	CACTVS	3.352	O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(O)=O)N2C=CC(=NC2=O)[SeH]
Canonical SMILES	OpenEye OEToolkits	1.7.0	C1=CN(C(=O)N=C1[SeH])[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)O
InChI	InChI	1.03	InChI=1S/C9H13N2O8PSe/c12-6-4(3-18-20(15,16)17)19-8(7(6)13)11-2-1-5(21)10-9(11)14/h1-2,4,6-8,12-13H,3H2,(H,10,14,21)(H2,15,16,17)/t4-,6-,7-,8-/m1/s1
InChIKey	InChI	1.03	ZCQCFKOZDRTETH-XVFCMESISA-N

Related Resource References

Resource Name	Reference
PubChem	49867807

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